Hi,
> I know that "shut down" on Windows doesn't actually shut everything down
If Wampserver is launched, that is to say if the services wampapache64, wampmysqld64 and wampmariadb64 as well as the executable AeTrayMenu are running, a real shutdown request from Windows will correctly close the services as well as the executable AeTrayMenu.
I just tried it again just now.
Do not confuse shutdown with sleep or deep sleep.
Eventually, see:
Open Windows Settings, then Accounts, then Connection Options
Disable Restart applications.
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Wampserver install files & addons